Publications

Peer-reviewed articles, preprints, and conference outputs.

Filter by topic using the category chips below. Each entry lists my specific contribution — first-author/lead work is distinguished from collaborative contributions. ## Presentations

Title Date Journal / Venue Categories
Sub-daily virus sampling at the Bermuda Atlantic Time Series reveals diel and depth-structured population dynamics without community-level shifts Jan 1, 2026 PLOS Biology Viromics, Environmental Research
CRESSENT: a bioinformatics toolkit to explore and improve ssDNA virus annotation Jan 1, 2026 Microbial Genomics Viromics, Bioinformatics Software
The vaginal microbiome of pregnant people living with HIV on antiretroviral therapy in the Democratic Republic of Congo: a pilot study and global meta-analysis Jan 1, 2026 mSphere Microbiome, Biomedical Research
Gene length is a pivotal feature to explain disparities in transcript capture between single transcriptome techniques Jan 1, 2023 Frontiers in Bioinformatics Machine Learning, Biomedical Research
Composition and functionality of bacterioplankton communities in marine coastal zones adjacent to finfish aquaculture Jan 1, 2022 Marine Pollution Bulletin Environmental Research, Microbiome
Network and machine learning analyses of estuarine microbial communities along a freshwater-marine mixed gradient Jan 1, 2022 Estuarine, Coastal and Shelf Science Environmental Research, Machine Learning
Effects of finfish farms on pelagic protist communities in a semi-closed stratified embayment Jan 1, 2022 bioRxiv (preprint) Environmental Research
Environmental influences shaping microbial communities in a low oxygen, highly stratified marine embayment Jan 1, 2021 Aquatic Microbial Ecology Environmental Research
Genotoxicity in Oreochromis niloticus (Cichlidae) induced by Microcystis spp bloom extract containing microcystins Jan 1, 2011 Toxicon Biomedical Research
Toxicity and genotoxicity in Astyanax bimaculatus (Characidae) induced by microcystins from a bloom of Microcystis spp Jan 1, 2010 Genetics and Molecular Biology Biomedical Research
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